Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Haglr-201ENSMUST00000100000 2085 ntBASIC12.63□□□□□ -0.39
Ss18Q62280 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ss18Q62280 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ss18Q62280 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ss18Q62280 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ss18Q62280 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ss18Q62280 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ss18Q62280 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ss18Q62280 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ss18Q62280 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ss18Q62280 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ss18Q62280 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.63□□□□□ -0.39
Ss18Q62280 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ss18Q62280 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ss18Q62280 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ss18Q62280 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.63□□□□□ -0.39
Ss18Q62280 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ss18Q62280 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ss18Q62280 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.63□□□□□ -0.39
Ss18Q62280 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ss18Q62280 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.62□□□□□ -0.39
Ss18Q62280 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ss18Q62280 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ss18Q62280 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ss18Q62280 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.62□□□□□ -0.39
Ss18Q62280 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ss18Q62280 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ss18Q62280 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.62□□□□□ -0.39
Ss18Q62280 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ss18Q62280 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.62□□□□□ -0.39
Ss18Q62280 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.62□□□□□ -0.39
Ss18Q62280 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ss18Q62280 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ss18Q62280 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ss18Q62280 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
Ss18Q62280 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.61□□□□□ -0.39
Ss18Q62280 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.61□□□□□ -0.39
Ss18Q62280 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ss18Q62280 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.6□□□□□ -0.39
Ss18Q62280 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Ss18Q62280 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Ss18Q62280 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.6□□□□□ -0.39
Ss18Q62280 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ss18Q62280 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Gm12933-201ENSMUST00000120203 872 ntBASIC12.6□□□□□ -0.39
Ss18Q62280 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.6□□□□□ -0.39
Ss18Q62280 Gm26524-201ENSMUST00000192339 390 ntBASIC12.6□□□□□ -0.39
Ss18Q62280 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms