Protein–RNA interactions for Protein: Q62186

Ssr4, Translocon-associated protein subunit delta, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr4Q62186 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr4Q62186 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr4Q62186 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr4Q62186 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr4Q62186 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ssr4Q62186 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr4Q62186 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr4Q62186 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr4Q62186 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ssr4Q62186 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr4Q62186 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr4Q62186 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr4Q62186 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr4Q62186 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr4Q62186 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr4Q62186 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr4Q62186 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.35■□□□□ 0.37
Ssr4Q62186 Gm12644-201ENSMUST00000119935 606 ntBASIC17.35■□□□□ 0.37
Ssr4Q62186 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr4Q62186 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.35■□□□□ 0.37
Ssr4Q62186 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr4Q62186 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ssr4Q62186 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ssr4Q62186 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr4Q62186 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Ssr4Q62186 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ssr4Q62186 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Ssr4Q62186 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.34■□□□□ 0.37
Ssr4Q62186 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Gm44450-201ENSMUST00000199528 114 ntBASIC17.34■□□□□ 0.37
Ssr4Q62186 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.34■□□□□ 0.37
Ssr4Q62186 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ssr4Q62186 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Rps4l-201ENSMUST00000071745 943 ntBASIC17.34■□□□□ 0.37
Ssr4Q62186 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.34■□□□□ 0.37
Ssr4Q62186 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ssr4Q62186 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.33■□□□□ 0.37
Ssr4Q62186 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssr4Q62186 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssr4Q62186 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssr4Q62186 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssr4Q62186 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssr4Q62186 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssr4Q62186 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ssr4Q62186 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.33■□□□□ 0.36
Ssr4Q62186 Gm13312-201ENSMUST00000119631 718 ntBASIC17.33■□□□□ 0.36
Ssr4Q62186 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ssr4Q62186 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.33■□□□□ 0.36
Ssr4Q62186 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.33■□□□□ 0.36
Ssr4Q62186 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssr4Q62186 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssr4Q62186 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssr4Q62186 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssr4Q62186 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssr4Q62186 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssr4Q62186 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ssr4Q62186 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ssr4Q62186 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssr4Q62186 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ssr4Q62186 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Ssr4Q62186 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssr4Q62186 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssr4Q62186 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ssr4Q62186 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.32■□□□□ 0.36
Ssr4Q62186 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.32■□□□□ 0.36
Ssr4Q62186 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.32■□□□□ 0.36
Ssr4Q62186 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.32■□□□□ 0.36
Ssr4Q62186 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.32■□□□□ 0.36
Ssr4Q62186 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssr4Q62186 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.32■□□□□ 0.36
Ssr4Q62186 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssr4Q62186 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssr4Q62186 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ssr4Q62186 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssr4Q62186 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssr4Q62186 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssr4Q62186 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssr4Q62186 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ssr4Q62186 Gm18421-201ENSMUST00000204122 625 ntBASIC17.31■□□□□ 0.36
Ssr4Q62186 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssr4Q62186 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssr4Q62186 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssr4Q62186 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssr4Q62186 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssr4Q62186 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms