Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.07□□□□□ -0.32
Notch3Q61982 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Notch3Q61982 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.07□□□□□ -0.32
Notch3Q61982 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.07□□□□□ -0.32
Notch3Q61982 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Gm21559-201ENSMUST00000220638 855 ntBASIC13.07□□□□□ -0.32
Notch3Q61982 Gm8587-201ENSMUST00000076538 843 ntBASIC13.07□□□□□ -0.32
Notch3Q61982 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.07□□□□□ -0.32
Notch3Q61982 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Notch3Q61982 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Notch3Q61982 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Notch3Q61982 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.07□□□□□ -0.32
Notch3Q61982 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.07□□□□□ -0.32
Notch3Q61982 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.07□□□□□ -0.32
Notch3Q61982 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Notch3Q61982 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.06□□□□□ -0.32
Notch3Q61982 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Notch3Q61982 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Gm25925-201ENSMUST00000158314 306 ntBASIC13.06□□□□□ -0.32
Notch3Q61982 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Notch3Q61982 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Notch3Q61982 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Notch3Q61982 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.06□□□□□ -0.32
Notch3Q61982 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Notch3Q61982 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.05□□□□□ -0.32
Notch3Q61982 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Gm4974-201ENSMUST00000209974 875 ntBASIC13.05□□□□□ -0.32
Notch3Q61982 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.05□□□□□ -0.32
Notch3Q61982 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Notch3Q61982 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Notch3Q61982 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Gm13401-201ENSMUST00000117074 291 ntBASIC13.05□□□□□ -0.32
Notch3Q61982 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Notch3Q61982 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Notch3Q61982 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Notch3Q61982 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Notch3Q61982 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Notch3Q61982 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Notch3Q61982 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Notch3Q61982 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Notch3Q61982 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Notch3Q61982 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Notch3Q61982 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.04□□□□□ -0.32
Notch3Q61982 Gm7370-201ENSMUST00000219471 767 ntBASIC13.04□□□□□ -0.32
Notch3Q61982 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms