Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.53□□□□□ -0.4
Foxc1Q61572 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Foxc1Q61572 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Foxc1Q61572 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxc1Q61572 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxc1Q61572 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxc1Q61572 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.52□□□□□ -0.4
Foxc1Q61572 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxc1Q61572 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxc1Q61572 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.52□□□□□ -0.41
Foxc1Q61572 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.52□□□□□ -0.41
Foxc1Q61572 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.52□□□□□ -0.41
Foxc1Q61572 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.52□□□□□ -0.41
Foxc1Q61572 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.52□□□□□ -0.41
Foxc1Q61572 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxc1Q61572 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Foxc1Q61572 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.51□□□□□ -0.41
Foxc1Q61572 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.51□□□□□ -0.41
Foxc1Q61572 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.51□□□□□ -0.41
Foxc1Q61572 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Foxc1Q61572 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Mir5122-201ENSMUST00000175004 89 ntBASIC12.51□□□□□ -0.41
Foxc1Q61572 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Foxc1Q61572 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.51□□□□□ -0.41
Foxc1Q61572 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Foxc1Q61572 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.51□□□□□ -0.41
Foxc1Q61572 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Foxc1Q61572 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.51□□□□□ -0.41
Foxc1Q61572 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Foxc1Q61572 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxc1Q61572 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.5□□□□□ -0.41
Foxc1Q61572 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.5□□□□□ -0.41
Foxc1Q61572 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.5□□□□□ -0.41
Foxc1Q61572 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.5□□□□□ -0.41
Foxc1Q61572 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Gm9987-201ENSMUST00000069768 567 ntBASIC12.5□□□□□ -0.41
Foxc1Q61572 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Foxc1Q61572 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.5□□□□□ -0.41
Foxc1Q61572 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxc1Q61572 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms