Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxd3Q61060 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxd3Q61060 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.67■□□□□ 0.1
Foxd3Q61060 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Foxd3Q61060 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxd3Q61060 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxd3Q61060 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Foxd3Q61060 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Foxd3Q61060 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Foxd3Q61060 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Foxd3Q61060 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Foxd3Q61060 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Foxd3Q61060 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Foxd3Q61060 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxd3Q61060 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.65■□□□□ 0.1
Foxd3Q61060 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Foxd3Q61060 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Foxd3Q61060 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Foxd3Q61060 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Gm11249-201ENSMUST00000117071 859 ntBASIC15.65■□□□□ 0.1
Foxd3Q61060 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.65■□□□□ 0.1
Foxd3Q61060 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.65■□□□□ 0.1
Foxd3Q61060 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Dio3-201ENSMUST00000097228 1449 ntBASIC15.65■□□□□ 0.1
Foxd3Q61060 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Foxd3Q61060 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.65■□□□□ 0.1
Foxd3Q61060 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.65■□□□□ 0.1
Foxd3Q61060 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd3Q61060 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.65■□□□□ 0.1
Foxd3Q61060 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Foxd3Q61060 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd3Q61060 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd3Q61060 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.64■□□□□ 0.09
Foxd3Q61060 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd3Q61060 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd3Q61060 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd3Q61060 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Foxd3Q61060 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd3Q61060 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.64■□□□□ 0.09
Foxd3Q61060 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.64■□□□□ 0.09
Foxd3Q61060 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Foxd3Q61060 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Foxd3Q61060 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd3Q61060 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Foxd3Q61060 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd3Q61060 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd3Q61060 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd3Q61060 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd3Q61060 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd3Q61060 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd3Q61060 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.63■□□□□ 0.09
Foxd3Q61060 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Foxd3Q61060 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Foxd3Q61060 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Foxd3Q61060 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.63■□□□□ 0.09
Foxd3Q61060 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Foxd3Q61060 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Foxd3Q61060 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Foxd3Q61060 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.63■□□□□ 0.09
Foxd3Q61060 Gm10138-203ENSMUST00000206952 366 ntBASIC15.63■□□□□ 0.09
Foxd3Q61060 Gm18101-201ENSMUST00000215769 548 ntBASIC15.63■□□□□ 0.09
Foxd3Q61060 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd3Q61060 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd3Q61060 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Foxd3Q61060 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.63■□□□□ 0.09
Foxd3Q61060 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd3Q61060 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd3Q61060 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd3Q61060 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms