Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.86■□□□□ 0.29
Col12a1Q60847 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
Col12a1Q60847 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.86■□□□□ 0.29
Col12a1Q60847 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col12a1Q60847 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Col12a1Q60847 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Col12a1Q60847 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.86■□□□□ 0.29
Col12a1Q60847 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col12a1Q60847 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col12a1Q60847 Gm29791-202ENSMUST00000207888 369 ntBASIC16.85■□□□□ 0.29
Col12a1Q60847 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Gm15173-201ENSMUST00000122049 433 ntBASIC16.85■□□□□ 0.29
Col12a1Q60847 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.85■□□□□ 0.29
Col12a1Q60847 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.85■□□□□ 0.29
Col12a1Q60847 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Col12a1Q60847 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Col12a1Q60847 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.85■□□□□ 0.29
Col12a1Q60847 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.85■□□□□ 0.29
Col12a1Q60847 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col12a1Q60847 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.84■□□□□ 0.29
Col12a1Q60847 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col12a1Q60847 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col12a1Q60847 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col12a1Q60847 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.84■□□□□ 0.29
Col12a1Q60847 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.84■□□□□ 0.29
Col12a1Q60847 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col12a1Q60847 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col12a1Q60847 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col12a1Q60847 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col12a1Q60847 Gm27628-201ENSMUST00000184911 107 ntBASIC16.84■□□□□ 0.29
Col12a1Q60847 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.84■□□□□ 0.29
Col12a1Q60847 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col12a1Q60847 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col12a1Q60847 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col12a1Q60847 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col12a1Q60847 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col12a1Q60847 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col12a1Q60847 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col12a1Q60847 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.83■□□□□ 0.29
Col12a1Q60847 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col12a1Q60847 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.83■□□□□ 0.29
Col12a1Q60847 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col12a1Q60847 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.83■□□□□ 0.29
Col12a1Q60847 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.83■□□□□ 0.29
Col12a1Q60847 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col12a1Q60847 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col12a1Q60847 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col12a1Q60847 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col12a1Q60847 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col12a1Q60847 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col12a1Q60847 Gm6550-201ENSMUST00000187574 993 ntBASIC16.83■□□□□ 0.28
Col12a1Q60847 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.83■□□□□ 0.28
Col12a1Q60847 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col12a1Q60847 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col12a1Q60847 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col12a1Q60847 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.83■□□□□ 0.28
Col12a1Q60847 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col12a1Q60847 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col12a1Q60847 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col12a1Q60847 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col12a1Q60847 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col12a1Q60847 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col12a1Q60847 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col12a1Q60847 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col12a1Q60847 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Col12a1Q60847 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col12a1Q60847 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col12a1Q60847 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Col12a1Q60847 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms