Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Gm7213-201ENSMUST00000215977 950 ntBASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom1Q5SX79 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Ank2-226ENSMUST00000189368 339 ntBASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Shroom1Q5SX79 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Mir8112-201ENSMUST00000184382 131 ntBASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom1Q5SX79 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom1Q5SX79 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms