Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-1Q5R1I8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-1Q5R1I8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Gm10571-201ENSMUST00000097869 1638 ntBASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-1Q5R1I8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms