Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Gm12821-201ENSMUST00000120022 600 ntBASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-3Q5R1C3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav3-3Q5R1C3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav3-3Q5R1C3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Smad6-203ENSMUST00000179458 273 ntBASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-3Q5R1C3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.82□□□□□ -0.36
Trav3-3Q5R1C3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms