Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.09□□□□□ -0.15
Trdv4Q5R1A3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trdv4Q5R1A3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Gm22240-201ENSMUST00000175225 82 ntBASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trdv4Q5R1A3 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv4Q5R1A3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Gm12085-201ENSMUST00000119263 940 ntBASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.06□□□□□ -0.16
Trdv4Q5R1A3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv4Q5R1A3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Gm37025-201ENSMUST00000195159 829 ntBASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms