Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3hdm4Q4VBF2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3hdm4Q4VBF2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3hdm4Q4VBF2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
R3hdm4Q4VBF2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3hdm4Q4VBF2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
R3hdm4Q4VBF2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
R3hdm4Q4VBF2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Gm10231-201ENSMUST00000181584 441 ntBASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Gm10175-202ENSMUST00000208752 441 ntBASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.39■□□□□ 0.53
R3hdm4Q4VBF2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Gm16061-201ENSMUST00000122167 857 ntBASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Mir5130-201ENSMUST00000175160 84 ntBASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Gm45058-201ENSMUST00000205810 766 ntBASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm4Q4VBF2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm4Q4VBF2 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm4Q4VBF2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Gm10566-201ENSMUST00000086739 996 ntBASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm4Q4VBF2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms