Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Gm6433-201ENSMUST00000118634 875 ntBASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Gm13474-201ENSMUST00000122466 815 ntBASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap2Q3V1H1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ckap2Q3V1H1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Gm45058-201ENSMUST00000205810 766 ntBASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap2Q3V1H1 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.52■□□□□ 0.72
Ckap2Q3V1H1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap2Q3V1H1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap2Q3V1H1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap2Q3V1H1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap2Q3V1H1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.52■□□□□ 0.72
Ckap2Q3V1H1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap2Q3V1H1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ckap2Q3V1H1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ckap2Q3V1H1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ckap2Q3V1H1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ckap2Q3V1H1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap2Q3V1H1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms