Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BC051142Q3V0M8 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.22■□□□□ 0.51
BC051142Q3V0M8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BC051142Q3V0M8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BC051142Q3V0M8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
BC051142Q3V0M8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BC051142Q3V0M8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BC051142Q3V0M8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BC051142Q3V0M8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC051142Q3V0M8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
BC051142Q3V0M8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
BC051142Q3V0M8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
BC051142Q3V0M8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.5
BC051142Q3V0M8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.2■□□□□ 0.5
BC051142Q3V0M8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.19■□□□□ 0.5
BC051142Q3V0M8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
BC051142Q3V0M8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC051142Q3V0M8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC051142Q3V0M8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC051142Q3V0M8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC051142Q3V0M8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC051142Q3V0M8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC051142Q3V0M8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BC051142Q3V0M8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC051142Q3V0M8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms