Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28047Q3US59 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28047Q3US59 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm28047Q3US59 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28047Q3US59 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm28047Q3US59 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm28047Q3US59 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Gm12085-201ENSMUST00000119263 940 ntBASIC19.39■□□□□ 0.69
Gm28047Q3US59 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28047Q3US59 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gm28047Q3US59 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28047Q3US59 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm28047Q3US59 Gm13168-201ENSMUST00000121771 632 ntBASIC19.38■□□□□ 0.69
Gm28047Q3US59 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28047Q3US59 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Gm28047Q3US59 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.38■□□□□ 0.69
Gm28047Q3US59 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Gm28047Q3US59 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28047Q3US59 Gm38027-201ENSMUST00000192315 235 ntBASIC19.38■□□□□ 0.69
Gm28047Q3US59 Gm9731-201ENSMUST00000209480 747 ntBASIC19.38■□□□□ 0.69
Gm28047Q3US59 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Gm28047Q3US59 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.38■□□□□ 0.69
Gm28047Q3US59 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28047Q3US59 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28047Q3US59 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28047Q3US59 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28047Q3US59 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gm28047Q3US59 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.37■□□□□ 0.69
Gm28047Q3US59 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm28047Q3US59 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28047Q3US59 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Mir1199-201ENSMUST00000117015 119 ntBASIC19.36■□□□□ 0.69
Gm28047Q3US59 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28047Q3US59 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms