Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Gm7638-201ENSMUST00000121348 967 ntBASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cracr2aQ3UP38 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Cracr2aQ3UP38 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cracr2aQ3UP38 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cracr2aQ3UP38 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Gm9731-201ENSMUST00000209480 747 ntBASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Gm9987-201ENSMUST00000069768 567 ntBASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cracr2aQ3UP38 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cracr2aQ3UP38 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Gm2274-201ENSMUST00000184539 609 ntBASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cracr2aQ3UP38 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cracr2aQ3UP38 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cracr2aQ3UP38 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cracr2aQ3UP38 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cracr2aQ3UP38 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms