Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col5a2Q3U962 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Gm18421-201ENSMUST00000204122 625 ntBASIC20.24■□□□□ 0.83
Col5a2Q3U962 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Gm15467-201ENSMUST00000120582 445 ntBASIC20.24■□□□□ 0.83
Col5a2Q3U962 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Col5a2Q3U962 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Col5a2Q3U962 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.23■□□□□ 0.83
Col5a2Q3U962 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Col5a2Q3U962 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Gm2213-201ENSMUST00000197485 688 ntBASIC20.23■□□□□ 0.83
Col5a2Q3U962 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col5a2Q3U962 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col5a2Q3U962 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.21■□□□□ 0.83
Col5a2Q3U962 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col5a2Q3U962 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col5a2Q3U962 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col5a2Q3U962 Gm25990-201ENSMUST00000102440 86 ntBASIC20.21■□□□□ 0.83
Col5a2Q3U962 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Col5a2Q3U962 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.21■□□□□ 0.83
Col5a2Q3U962 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.21■□□□□ 0.83
Col5a2Q3U962 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.21■□□□□ 0.83
Col5a2Q3U962 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.21■□□□□ 0.83
Col5a2Q3U962 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col5a2Q3U962 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col5a2Q3U962 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Col5a2Q3U962 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col5a2Q3U962 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col5a2Q3U962 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col5a2Q3U962 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col5a2Q3U962 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col5a2Q3U962 Gm7230-201ENSMUST00000173026 815 ntBASIC20.2■□□□□ 0.82
Col5a2Q3U962 Gm2756-201ENSMUST00000195851 400 ntBASIC20.2■□□□□ 0.82
Col5a2Q3U962 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.2■□□□□ 0.82
Col5a2Q3U962 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Col5a2Q3U962 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Col5a2Q3U962 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col5a2Q3U962 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col5a2Q3U962 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col5a2Q3U962 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col5a2Q3U962 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col5a2Q3U962 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col5a2Q3U962 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col5a2Q3U962 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col5a2Q3U962 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.19■□□□□ 0.82
Col5a2Q3U962 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col5a2Q3U962 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms