Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.11■□□□□ 0.33
Cdkl4Q3TZA2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Cdkl4Q3TZA2 Gm37025-201ENSMUST00000195159 829 ntBASIC17.11■□□□□ 0.33
Cdkl4Q3TZA2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl4Q3TZA2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl4Q3TZA2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl4Q3TZA2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl4Q3TZA2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl4Q3TZA2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl4Q3TZA2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkl4Q3TZA2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 Gm45058-201ENSMUST00000205810 766 ntBASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.1■□□□□ 0.33
Cdkl4Q3TZA2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 Mir5130-201ENSMUST00000175160 84 ntBASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl4Q3TZA2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkl4Q3TZA2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkl4Q3TZA2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Cdkl4Q3TZA2 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.08■□□□□ 0.33
Cdkl4Q3TZA2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkl4Q3TZA2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkl4Q3TZA2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 Gm17661-201ENSMUST00000170317 270 ntBASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cdkl4Q3TZA2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdkl4Q3TZA2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Gm9731-201ENSMUST00000209480 747 ntBASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl4Q3TZA2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms