Protein–RNA interactions for Protein: Q30KM9

Defb43, Beta-defensin 43, mousemouse

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb43Q30KM9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.04■□□□□ 0.16
Defb43Q30KM9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Defb43Q30KM9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Defb43Q30KM9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Gm27463-201ENSMUST00000183569 57 ntBASIC16.03■□□□□ 0.16
Defb43Q30KM9 Mir6982-201ENSMUST00000184354 68 ntBASIC16.03■□□□□ 0.16
Defb43Q30KM9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Defb43Q30KM9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Defb43Q30KM9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Defb43Q30KM9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Defb43Q30KM9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Defb43Q30KM9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Defb43Q30KM9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Defb43Q30KM9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Defb43Q30KM9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.02■□□□□ 0.16
Defb43Q30KM9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.02■□□□□ 0.16
Defb43Q30KM9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Defb43Q30KM9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Defb43Q30KM9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.02■□□□□ 0.16
Defb43Q30KM9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.02■□□□□ 0.16
Defb43Q30KM9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Defb43Q30KM9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Defb43Q30KM9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Defb43Q30KM9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Defb43Q30KM9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Defb43Q30KM9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Defb43Q30KM9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Defb43Q30KM9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.01■□□□□ 0.15
Defb43Q30KM9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Defb43Q30KM9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Defb43Q30KM9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Defb43Q30KM9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Defb43Q30KM9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Defb43Q30KM9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Defb43Q30KM9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.01■□□□□ 0.15
Defb43Q30KM9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.01■□□□□ 0.15
Defb43Q30KM9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Defb43Q30KM9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Defb43Q30KM9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Defb43Q30KM9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Defb43Q30KM9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16■□□□□ 0.15
Defb43Q30KM9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Defb43Q30KM9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Defb43Q30KM9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Defb43Q30KM9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Defb43Q30KM9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16■□□□□ 0.15
Defb43Q30KM9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Defb43Q30KM9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16■□□□□ 0.15
Defb43Q30KM9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16■□□□□ 0.15
Defb43Q30KM9 Gm11539-201ENSMUST00000119837 557 ntBASIC16■□□□□ 0.15
Defb43Q30KM9 Gm13436-201ENSMUST00000120418 567 ntBASIC16■□□□□ 0.15
Defb43Q30KM9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16■□□□□ 0.15
Defb43Q30KM9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Defb43Q30KM9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16■□□□□ 0.15
Defb43Q30KM9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Defb43Q30KM9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Defb43Q30KM9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms