Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Dancr-204ENSMUST00000132389 2347 ntBASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptchd3Q0EEE2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptchd3Q0EEE2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Mir8112-201ENSMUST00000184382 131 ntBASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptchd3Q0EEE2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptchd3Q0EEE2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms