Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SgcaP82350 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SgcaP82350 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.34□□□□□ -0.11
SgcaP82350 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SgcaP82350 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SgcaP82350 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.34□□□□□ -0.11
SgcaP82350 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
SgcaP82350 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SgcaP82350 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.34□□□□□ -0.11
SgcaP82350 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcaP82350 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
SgcaP82350 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.33□□□□□ -0.11
SgcaP82350 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SgcaP82350 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SgcaP82350 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SgcaP82350 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SgcaP82350 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SgcaP82350 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.33□□□□□ -0.11
SgcaP82350 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcaP82350 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.33□□□□□ -0.12
SgcaP82350 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcaP82350 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcaP82350 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SgcaP82350 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.33□□□□□ -0.12
SgcaP82350 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SgcaP82350 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.33□□□□□ -0.12
SgcaP82350 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.33□□□□□ -0.12
SgcaP82350 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcaP82350 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.33□□□□□ -0.12
SgcaP82350 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SgcaP82350 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcaP82350 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SgcaP82350 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcaP82350 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SgcaP82350 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SgcaP82350 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcaP82350 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SgcaP82350 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
SgcaP82350 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcaP82350 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcaP82350 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SgcaP82350 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SgcaP82350 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.32□□□□□ -0.12
SgcaP82350 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.32□□□□□ -0.12
SgcaP82350 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.32□□□□□ -0.12
SgcaP82350 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.32□□□□□ -0.12
SgcaP82350 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.32□□□□□ -0.12
SgcaP82350 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SgcaP82350 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcaP82350 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SgcaP82350 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcaP82350 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcaP82350 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcaP82350 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcaP82350 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
SgcaP82350 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SgcaP82350 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcaP82350 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.31□□□□□ -0.12
SgcaP82350 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.31□□□□□ -0.12
SgcaP82350 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SgcaP82350 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.31□□□□□ -0.12
SgcaP82350 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SgcaP82350 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcaP82350 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcaP82350 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SgcaP82350 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms