Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Tpm1P58771 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Tpm1P58771 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.06■□□□□ 0.64
Tpm1P58771 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.05■□□□□ 0.64
Tpm1P58771 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Tpm1P58771 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19.05■□□□□ 0.64
Tpm1P58771 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.05■□□□□ 0.64
Tpm1P58771 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19.05■□□□□ 0.64
Tpm1P58771 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.05■□□□□ 0.64
Tpm1P58771 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Tpm1P58771 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Tpm1P58771 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Tpm1P58771 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm1P58771 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Tpm1P58771 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.04■□□□□ 0.64
Tpm1P58771 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.04■□□□□ 0.64
Tpm1P58771 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.04■□□□□ 0.64
Tpm1P58771 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm1P58771 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm1P58771 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tpm1P58771 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm1P58771 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm1P58771 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm1P58771 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm1P58771 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm1P58771 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
Tpm1P58771 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm1P58771 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
Tpm1P58771 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Tpm1P58771 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm1P58771 Gm6365-201ENSMUST00000054711 744 ntBASIC19.03■□□□□ 0.64
Tpm1P58771 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm1P58771 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm1P58771 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm1P58771 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm1P58771 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm1P58771 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm1P58771 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm1P58771 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm1P58771 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm1P58771 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.02■□□□□ 0.64
Tpm1P58771 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm1P58771 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm1P58771 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm1P58771 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Tpm1P58771 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tpm1P58771 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Tpm1P58771 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tpm1P58771 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Tpm1P58771 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.01■□□□□ 0.63
Tpm1P58771 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms