Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.15■□□□□ 0.5
NrlP54846 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NrlP54846 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NrlP54846 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NrlP54846 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NrlP54846 Gm7153-201ENSMUST00000117092 455 ntBASIC18.15■□□□□ 0.5
NrlP54846 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NrlP54846 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NrlP54846 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.15■□□□□ 0.5
NrlP54846 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
NrlP54846 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NrlP54846 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.15■□□□□ 0.5
NrlP54846 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NrlP54846 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NrlP54846 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NrlP54846 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NrlP54846 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
NrlP54846 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NrlP54846 Actl10-202ENSMUST00000226583 1501 ntBASIC18.14■□□□□ 0.49
NrlP54846 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NrlP54846 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NrlP54846 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NrlP54846 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
NrlP54846 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NrlP54846 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NrlP54846 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NrlP54846 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NrlP54846 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NrlP54846 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NrlP54846 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NrlP54846 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NrlP54846 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NrlP54846 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NrlP54846 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
NrlP54846 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NrlP54846 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NrlP54846 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.13■□□□□ 0.49
NrlP54846 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
NrlP54846 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.13■□□□□ 0.49
NrlP54846 Gm6623-201ENSMUST00000173570 544 ntBASIC18.13■□□□□ 0.49
NrlP54846 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.13■□□□□ 0.49
NrlP54846 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.13■□□□□ 0.49
NrlP54846 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NrlP54846 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NrlP54846 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.12■□□□□ 0.49
NrlP54846 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NrlP54846 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NrlP54846 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.12■□□□□ 0.49
NrlP54846 Mir3081-201ENSMUST00000175305 84 ntBASIC18.12■□□□□ 0.49
NrlP54846 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.12■□□□□ 0.49
NrlP54846 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.12■□□□□ 0.49
NrlP54846 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NrlP54846 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 Gm7461-201ENSMUST00000058918 827 ntBASIC18.12■□□□□ 0.49
NrlP54846 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NrlP54846 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NrlP54846 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
NrlP54846 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NrlP54846 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NrlP54846 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NrlP54846 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NrlP54846 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NrlP54846 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NrlP54846 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NrlP54846 Gm27357-201ENSMUST00000183754 135 ntBASIC18.11■□□□□ 0.49
NrlP54846 Gm27742-201ENSMUST00000184667 60 ntBASIC18.11■□□□□ 0.49
NrlP54846 Gm37722-201ENSMUST00000193757 208 ntBASIC18.11■□□□□ 0.49
NrlP54846 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NrlP54846 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NrlP54846 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NrlP54846 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NrlP54846 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NrlP54846 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NrlP54846 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NrlP54846 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms