Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx6P54823 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx6P54823 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.34■□□□□ 0.37
Ddx6P54823 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx6P54823 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx6P54823 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx6P54823 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx6P54823 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx6P54823 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ddx6P54823 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx6P54823 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx6P54823 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx6P54823 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx6P54823 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.33■□□□□ 0.37
Ddx6P54823 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx6P54823 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx6P54823 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx6P54823 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx6P54823 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx6P54823 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx6P54823 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx6P54823 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Ddx6P54823 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx6P54823 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ddx6P54823 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx6P54823 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.33■□□□□ 0.36
Ddx6P54823 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx6P54823 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.32■□□□□ 0.36
Ddx6P54823 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ddx6P54823 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ddx6P54823 Gm7153-201ENSMUST00000117092 455 ntBASIC17.32■□□□□ 0.36
Ddx6P54823 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.32■□□□□ 0.36
Ddx6P54823 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ddx6P54823 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.32■□□□□ 0.36
Ddx6P54823 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.32■□□□□ 0.36
Ddx6P54823 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.32■□□□□ 0.36
Ddx6P54823 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx6P54823 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx6P54823 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ddx6P54823 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ddx6P54823 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.31■□□□□ 0.36
Ddx6P54823 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ddx6P54823 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx6P54823 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ddx6P54823 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx6P54823 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx6P54823 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx6P54823 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx6P54823 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx6P54823 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ddx6P54823 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx6P54823 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx6P54823 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx6P54823 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
Ddx6P54823 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx6P54823 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx6P54823 Grk6-206ENSMUST00000224995 2971 ntBASIC17.3■□□□□ 0.36
Ddx6P54823 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx6P54823 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ddx6P54823 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.3■□□□□ 0.36
Ddx6P54823 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx6P54823 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.3■□□□□ 0.36
Ddx6P54823 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx6P54823 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx6P54823 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.3■□□□□ 0.36
Ddx6P54823 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.3■□□□□ 0.36
Ddx6P54823 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx6P54823 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx6P54823 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.3■□□□□ 0.36
Ddx6P54823 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx6P54823 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx6P54823 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx6P54823 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx6P54823 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx6P54823 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx6P54823 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx6P54823 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx6P54823 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx6P54823 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx6P54823 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms