Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LmnaP48678 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LmnaP48678 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LmnaP48678 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LmnaP48678 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LmnaP48678 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LmnaP48678 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LmnaP48678 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LmnaP48678 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LmnaP48678 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LmnaP48678 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.64■□□□□ 0.41
LmnaP48678 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LmnaP48678 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.63■□□□□ 0.41
LmnaP48678 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.63■□□□□ 0.41
LmnaP48678 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.63■□□□□ 0.41
LmnaP48678 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.63■□□□□ 0.41
LmnaP48678 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LmnaP48678 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LmnaP48678 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LmnaP48678 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.62■□□□□ 0.41
LmnaP48678 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LmnaP48678 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.62■□□□□ 0.41
LmnaP48678 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.62■□□□□ 0.41
LmnaP48678 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LmnaP48678 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.62■□□□□ 0.41
LmnaP48678 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LmnaP48678 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LmnaP48678 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.61■□□□□ 0.41
LmnaP48678 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.61■□□□□ 0.41
LmnaP48678 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LmnaP48678 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.61■□□□□ 0.41
LmnaP48678 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.61■□□□□ 0.41
LmnaP48678 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.61■□□□□ 0.41
LmnaP48678 Gm18669-201ENSMUST00000216049 778 ntBASIC17.61■□□□□ 0.41
LmnaP48678 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LmnaP48678 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LmnaP48678 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LmnaP48678 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
LmnaP48678 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LmnaP48678 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LmnaP48678 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LmnaP48678 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
LmnaP48678 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.6■□□□□ 0.41
LmnaP48678 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LmnaP48678 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LmnaP48678 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LmnaP48678 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LmnaP48678 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.6■□□□□ 0.41
LmnaP48678 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LmnaP48678 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LmnaP48678 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.6■□□□□ 0.41
LmnaP48678 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LmnaP48678 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LmnaP48678 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LmnaP48678 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
LmnaP48678 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms