Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Serp2-204ENSMUST00000228055 705 ntBASIC11.18□□□□□ -0.62
Xcl1P47993 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Xcl1P47993 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.18□□□□□ -0.62
Xcl1P47993 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Xcl1P47993 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Xcl1P47993 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Xcl1P47993 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Xcl1P47993 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
Xcl1P47993 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Xcl1P47993 Gm11687-201ENSMUST00000118911 886 ntBASIC11.17□□□□□ -0.62
Xcl1P47993 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC11.17□□□□□ -0.62
Xcl1P47993 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC11.17□□□□□ -0.62
Xcl1P47993 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Xcl1P47993 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.17□□□□□ -0.62
Xcl1P47993 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Xcl1P47993 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Xcl1P47993 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Xcl1P47993 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Xcl1P47993 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.16□□□□□ -0.62
Xcl1P47993 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Gm37805-201ENSMUST00000192612 1094 ntBASIC11.16□□□□□ -0.62
Xcl1P47993 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC11.16□□□□□ -0.62
Xcl1P47993 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC11.16□□□□□ -0.62
Xcl1P47993 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Xcl1P47993 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC11.16□□□□□ -0.62
Xcl1P47993 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Xcl1P47993 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Xcl1P47993 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Xcl1P47993 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Xcl1P47993 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.15□□□□□ -0.62
Xcl1P47993 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms