Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.34■□□□□ 0.37
Vps4bP46467 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Vps4bP46467 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps4bP46467 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps4bP46467 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps4bP46467 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps4bP46467 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vps4bP46467 Gm12382-201ENSMUST00000122005 922 ntBASIC17.33■□□□□ 0.36
Vps4bP46467 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vps4bP46467 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.33■□□□□ 0.36
Vps4bP46467 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps4bP46467 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vps4bP46467 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.33■□□□□ 0.36
Vps4bP46467 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps4bP46467 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps4bP46467 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps4bP46467 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps4bP46467 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4bP46467 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Vps4bP46467 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.32■□□□□ 0.36
Vps4bP46467 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4bP46467 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Vps4bP46467 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4bP46467 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4bP46467 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4bP46467 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4bP46467 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4bP46467 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.32■□□□□ 0.36
Vps4bP46467 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.32■□□□□ 0.36
Vps4bP46467 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Vps4bP46467 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4bP46467 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.32■□□□□ 0.36
Vps4bP46467 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4bP46467 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4bP46467 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps4bP46467 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Vps4bP46467 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.31■□□□□ 0.36
Vps4bP46467 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps4bP46467 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Vps4bP46467 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps4bP46467 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4bP46467 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4bP46467 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Vps4bP46467 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.3■□□□□ 0.36
Vps4bP46467 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.3■□□□□ 0.36
Vps4bP46467 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.3■□□□□ 0.36
Vps4bP46467 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Vps4bP46467 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4bP46467 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4bP46467 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4bP46467 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4bP46467 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.3■□□□□ 0.36
Vps4bP46467 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4bP46467 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4bP46467 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4bP46467 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps4bP46467 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.29■□□□□ 0.36
Vps4bP46467 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.29■□□□□ 0.36
Vps4bP46467 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.29■□□□□ 0.36
Vps4bP46467 Gm37292-201ENSMUST00000192062 758 ntBASIC17.29■□□□□ 0.36
Vps4bP46467 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.29■□□□□ 0.36
Vps4bP46467 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps4bP46467 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4bP46467 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.28■□□□□ 0.36
Vps4bP46467 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4bP46467 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.28■□□□□ 0.36
Vps4bP46467 Trmt13-210ENSMUST00000198454 880 ntBASIC17.28■□□□□ 0.36
Vps4bP46467 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vps4bP46467 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4bP46467 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vps4bP46467 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4bP46467 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4bP46467 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4bP46467 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms