Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdc2P43407 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.15■□□□□ 0.66
Sdc2P43407 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sdc2P43407 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sdc2P43407 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdc2P43407 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdc2P43407 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdc2P43407 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdc2P43407 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Sdc2P43407 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.14■□□□□ 0.66
Sdc2P43407 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc2P43407 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc2P43407 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc2P43407 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.14■□□□□ 0.65
Sdc2P43407 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc2P43407 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.14■□□□□ 0.65
Sdc2P43407 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc2P43407 Gm10517-202ENSMUST00000192970 758 ntBASIC19.14■□□□□ 0.65
Sdc2P43407 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.14■□□□□ 0.65
Sdc2P43407 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Sdc2P43407 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc2P43407 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc2P43407 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Sdc2P43407 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Sdc2P43407 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc2P43407 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc2P43407 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc2P43407 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc2P43407 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.13■□□□□ 0.65
Sdc2P43407 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc2P43407 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.13■□□□□ 0.65
Sdc2P43407 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sdc2P43407 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc2P43407 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc2P43407 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc2P43407 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc2P43407 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc2P43407 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc2P43407 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc2P43407 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.12■□□□□ 0.65
Sdc2P43407 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc2P43407 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.12■□□□□ 0.65
Sdc2P43407 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.12■□□□□ 0.65
Sdc2P43407 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.12■□□□□ 0.65
Sdc2P43407 Gm37856-201ENSMUST00000191634 999 ntBASIC19.12■□□□□ 0.65
Sdc2P43407 Trmt13-210ENSMUST00000198454 880 ntBASIC19.12■□□□□ 0.65
Sdc2P43407 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.12■□□□□ 0.65
Sdc2P43407 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc2P43407 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc2P43407 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Sdc2P43407 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc2P43407 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc2P43407 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc2P43407 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Sdc2P43407 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc2P43407 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Sdc2P43407 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Sdc2P43407 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc2P43407 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc2P43407 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Sdc2P43407 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdc2P43407 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sdc2P43407 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdc2P43407 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sdc2P43407 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sdc2P43407 Gm12527-201ENSMUST00000117967 564 ntBASIC19.11■□□□□ 0.65
Sdc2P43407 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.11■□□□□ 0.65
Sdc2P43407 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.11■□□□□ 0.65
Sdc2P43407 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sdc2P43407 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.11■□□□□ 0.65
Sdc2P43407 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdc2P43407 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Sdc2P43407 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc2P43407 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc2P43407 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc2P43407 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc2P43407 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sdc2P43407 Gm43183-201ENSMUST00000200632 547 ntBASIC19.1■□□□□ 0.65
Sdc2P43407 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc2P43407 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.1■□□□□ 0.65
Sdc2P43407 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Sdc2P43407 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc2P43407 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc2P43407 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc2P43407 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc2P43407 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc2P43407 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Sdc2P43407 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc2P43407 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Sdc2P43407 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc2P43407 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc2P43407 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc2P43407 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Sdc2P43407 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Sdc2P43407 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc2P43407 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc2P43407 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc2P43407 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.09■□□□□ 0.65
Sdc2P43407 Haglr-201ENSMUST00000100000 2085 ntBASIC19.09■□□□□ 0.65
Sdc2P43407 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms