Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcl12P40224 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cxcl12P40224 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Cxcl12P40224 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcl12P40224 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Cxcl12P40224 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcl12P40224 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcl12P40224 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cxcl12P40224 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.58■□□□□ 0.4
Cxcl12P40224 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcl12P40224 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Cxcl12P40224 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcl12P40224 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcl12P40224 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cxcl12P40224 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcl12P40224 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcl12P40224 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcl12P40224 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcl12P40224 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cxcl12P40224 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcl12P40224 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cxcl12P40224 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcl12P40224 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cxcl12P40224 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cxcl12P40224 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcl12P40224 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Cxcl12P40224 Gm2756-201ENSMUST00000195851 400 ntBASIC17.57■□□□□ 0.4
Cxcl12P40224 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.57■□□□□ 0.4
Cxcl12P40224 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.57■□□□□ 0.4
Cxcl12P40224 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Cxcl12P40224 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcl12P40224 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcl12P40224 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcl12P40224 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cxcl12P40224 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcl12P40224 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cxcl12P40224 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.57■□□□□ 0.4
Cxcl12P40224 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cxcl12P40224 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cxcl12P40224 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cxcl12P40224 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cxcl12P40224 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.56■□□□□ 0.4
Cxcl12P40224 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Mir5126-201ENSMUST00000175513 77 ntBASIC17.56■□□□□ 0.4
Cxcl12P40224 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cxcl12P40224 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.56■□□□□ 0.4
Cxcl12P40224 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.56■□□□□ 0.4
Cxcl12P40224 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cxcl12P40224 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cxcl12P40224 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cxcl12P40224 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cxcl12P40224 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 Idnk-204ENSMUST00000226010 1898 ntBASIC17.55■□□□□ 0.4
Cxcl12P40224 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.55■□□□□ 0.4
Cxcl12P40224 Gm29707-201ENSMUST00000196325 491 ntBASIC17.55■□□□□ 0.4
Cxcl12P40224 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Cxcl12P40224 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.55■□□□□ 0.4
Cxcl12P40224 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cxcl12P40224 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cxcl12P40224 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Cxcl12P40224 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cxcl12P40224 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cxcl12P40224 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cxcl12P40224 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cxcl12P40224 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cxcl12P40224 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cxcl12P40224 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.54■□□□□ 0.4
Cxcl12P40224 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cxcl12P40224 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cxcl12P40224 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cxcl12P40224 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.54■□□□□ 0.4
Cxcl12P40224 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cxcl12P40224 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cxcl12P40224 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms