Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.32■□□□□ 0.2
Cdh4P39038 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.32■□□□□ 0.2
Cdh4P39038 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.32■□□□□ 0.2
Cdh4P39038 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.32■□□□□ 0.2
Cdh4P39038 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.32■□□□□ 0.2
Cdh4P39038 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.32■□□□□ 0.2
Cdh4P39038 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cdh4P39038 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh4P39038 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cdh4P39038 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdh4P39038 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdh4P39038 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cdh4P39038 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdh4P39038 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Cdh4P39038 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.31■□□□□ 0.2
Cdh4P39038 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdh4P39038 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdh4P39038 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdh4P39038 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh4P39038 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cdh4P39038 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cdh4P39038 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdh4P39038 Gm6433-201ENSMUST00000118634 875 ntBASIC16.3■□□□□ 0.2
Cdh4P39038 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.3■□□□□ 0.2
Cdh4P39038 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.3■□□□□ 0.2
Cdh4P39038 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.3■□□□□ 0.2
Cdh4P39038 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh4P39038 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh4P39038 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdh4P39038 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cdh4P39038 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh4P39038 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh4P39038 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh4P39038 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cdh4P39038 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cdh4P39038 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Cdh4P39038 Gm2274-201ENSMUST00000184539 609 ntBASIC16.29■□□□□ 0.2
Cdh4P39038 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh4P39038 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh4P39038 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh4P39038 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh4P39038 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh4P39038 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh4P39038 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh4P39038 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh4P39038 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh4P39038 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh4P39038 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh4P39038 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh4P39038 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh4P39038 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh4P39038 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Cdh4P39038 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms