Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a11P31650 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a11P31650 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a11P31650 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Slc6a11P31650 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Slc6a11P31650 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Slc6a11P31650 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Slc6a11P31650 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.2■□□□□ 0.18
Slc6a11P31650 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Slc6a11P31650 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Slc6a11P31650 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.2■□□□□ 0.18
Slc6a11P31650 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Slc6a11P31650 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a11P31650 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a11P31650 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a11P31650 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a11P31650 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a11P31650 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a11P31650 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.19■□□□□ 0.18
Slc6a11P31650 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a11P31650 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.19■□□□□ 0.18
Slc6a11P31650 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.19■□□□□ 0.18
Slc6a11P31650 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Slc6a11P31650 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.19■□□□□ 0.18
Slc6a11P31650 Gm9987-201ENSMUST00000069768 567 ntBASIC16.19■□□□□ 0.18
Slc6a11P31650 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a11P31650 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a11P31650 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a11P31650 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a11P31650 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a11P31650 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a11P31650 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Flg-201ENSMUST00000050758 1488 ntBASIC16.18■□□□□ 0.18
Slc6a11P31650 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Gm13158-201ENSMUST00000122007 736 ntBASIC16.18■□□□□ 0.18
Slc6a11P31650 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc6a11P31650 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.18■□□□□ 0.18
Slc6a11P31650 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Slc6a11P31650 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.18■□□□□ 0.18
Slc6a11P31650 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a11P31650 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Slc6a11P31650 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Slc6a11P31650 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Slc6a11P31650 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.17■□□□□ 0.18
Slc6a11P31650 Gm13216-201ENSMUST00000117145 591 ntBASIC16.17■□□□□ 0.18
Slc6a11P31650 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.17■□□□□ 0.18
Slc6a11P31650 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Slc6a11P31650 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a11P31650 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Slc6a11P31650 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.16■□□□□ 0.18
Slc6a11P31650 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a11P31650 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Slc6a11P31650 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a11P31650 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.16■□□□□ 0.18
Slc6a11P31650 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Slc6a11P31650 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Slc6a11P31650 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Slc6a11P31650 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.16■□□□□ 0.18
Slc6a11P31650 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.16■□□□□ 0.18
Slc6a11P31650 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms