Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RxrbP28704 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RxrbP28704 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RxrbP28704 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RxrbP28704 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RxrbP28704 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RxrbP28704 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.16■□□□□ 0.34
RxrbP28704 Gm44549-201ENSMUST00000208351 577 ntBASIC17.16■□□□□ 0.34
RxrbP28704 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RxrbP28704 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RxrbP28704 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RxrbP28704 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.16■□□□□ 0.34
RxrbP28704 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.16■□□□□ 0.34
RxrbP28704 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RxrbP28704 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RxrbP28704 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RxrbP28704 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RxrbP28704 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RxrbP28704 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RxrbP28704 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RxrbP28704 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RxrbP28704 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RxrbP28704 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.15■□□□□ 0.34
RxrbP28704 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RxrbP28704 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RxrbP28704 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.14■□□□□ 0.33
RxrbP28704 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.14■□□□□ 0.33
RxrbP28704 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RxrbP28704 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Zfp783-201ENSMUST00000095946 670 ntBASIC17.14■□□□□ 0.33
RxrbP28704 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RxrbP28704 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RxrbP28704 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RxrbP28704 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RxrbP28704 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RxrbP28704 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.13■□□□□ 0.33
RxrbP28704 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Flg-201ENSMUST00000050758 1488 ntBASIC17.13■□□□□ 0.33
RxrbP28704 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Gm27405-201ENSMUST00000184201 112 ntBASIC17.13■□□□□ 0.33
RxrbP28704 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.13■□□□□ 0.33
RxrbP28704 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.13■□□□□ 0.33
RxrbP28704 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RxrbP28704 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RxrbP28704 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.12■□□□□ 0.33
RxrbP28704 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RxrbP28704 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RxrbP28704 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.12■□□□□ 0.33
RxrbP28704 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RxrbP28704 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RxrbP28704 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.12■□□□□ 0.33
RxrbP28704 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RxrbP28704 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RxrbP28704 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.12■□□□□ 0.33
RxrbP28704 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RxrbP28704 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.12■□□□□ 0.33
RxrbP28704 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RxrbP28704 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RxrbP28704 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RxrbP28704 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RxrbP28704 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.12■□□□□ 0.33
RxrbP28704 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RxrbP28704 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RxrbP28704 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RxrbP28704 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms