Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nckap1P28660 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nckap1P28660 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nckap1P28660 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Nckap1P28660 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Gm9103-201ENSMUST00000119371 405 ntBASIC16.98■□□□□ 0.31
Nckap1P28660 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Gm29518-201ENSMUST00000190858 372 ntBASIC16.98■□□□□ 0.31
Nckap1P28660 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.98■□□□□ 0.31
Nckap1P28660 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
Nckap1P28660 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.98■□□□□ 0.31
Nckap1P28660 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.98■□□□□ 0.31
Nckap1P28660 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nckap1P28660 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Nckap1P28660 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nckap1P28660 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Nckap1P28660 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Nckap1P28660 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nckap1P28660 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Nckap1P28660 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.97■□□□□ 0.31
Nckap1P28660 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nckap1P28660 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
Nckap1P28660 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nckap1P28660 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 Ank2-226ENSMUST00000189368 339 ntBASIC16.96■□□□□ 0.31
Nckap1P28660 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nckap1P28660 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Nckap1P28660 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Nckap1P28660 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Nckap1P28660 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nckap1P28660 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Nckap1P28660 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Nckap1P28660 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nckap1P28660 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nckap1P28660 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.95■□□□□ 0.3
Nckap1P28660 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.95■□□□□ 0.3
Nckap1P28660 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.95■□□□□ 0.3
Nckap1P28660 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nckap1P28660 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nckap1P28660 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nckap1P28660 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nckap1P28660 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nckap1P28660 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.95■□□□□ 0.3
Nckap1P28660 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.95■□□□□ 0.3
Nckap1P28660 Gm17808-201ENSMUST00000200859 894 ntBASIC16.95■□□□□ 0.3
Nckap1P28660 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.95■□□□□ 0.3
Nckap1P28660 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nckap1P28660 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nckap1P28660 Gm10566-201ENSMUST00000086739 996 ntBASIC16.95■□□□□ 0.3
Nckap1P28660 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.95■□□□□ 0.3
Nckap1P28660 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nckap1P28660 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nckap1P28660 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nckap1P28660 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nckap1P28660 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nckap1P28660 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nckap1P28660 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nckap1P28660 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nckap1P28660 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nckap1P28660 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nckap1P28660 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nckap1P28660 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Nckap1P28660 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.94■□□□□ 0.3
Nckap1P28660 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms