Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl6P27784 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl6P27784 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl6P27784 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl6P27784 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl6P27784 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccl6P27784 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccl6P27784 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccl6P27784 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Ccl6P27784 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccl6P27784 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.31□□□□□ -0.28
Ccl6P27784 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ccl6P27784 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl6P27784 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccl6P27784 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccl6P27784 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccl6P27784 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl6P27784 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl6P27784 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl6P27784 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.3□□□□□ -0.28
Ccl6P27784 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl6P27784 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl6P27784 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl6P27784 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.3□□□□□ -0.28
Ccl6P27784 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccl6P27784 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl6P27784 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.3□□□□□ -0.28
Ccl6P27784 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl6P27784 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl6P27784 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.3□□□□□ -0.28
Ccl6P27784 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl6P27784 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl6P27784 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl6P27784 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl6P27784 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl6P27784 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl6P27784 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl6P27784 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ccl6P27784 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl6P27784 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccl6P27784 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Ccl6P27784 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccl6P27784 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccl6P27784 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccl6P27784 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.29□□□□□ -0.28
Ccl6P27784 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccl6P27784 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Ccl6P27784 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccl6P27784 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.29□□□□□ -0.28
Ccl6P27784 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccl6P27784 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl6P27784 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl6P27784 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl6P27784 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl6P27784 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.28□□□□□ -0.28
Ccl6P27784 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccl6P27784 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Ccl6P27784 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl6P27784 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl6P27784 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccl6P27784 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccl6P27784 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccl6P27784 Gm8520-201ENSMUST00000186517 868 ntBASIC13.28□□□□□ -0.28
Ccl6P27784 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccl6P27784 Gm4974-201ENSMUST00000209974 875 ntBASIC13.28□□□□□ -0.28
Ccl6P27784 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl6P27784 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl6P27784 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl6P27784 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccl6P27784 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl6P27784 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms