Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Gm27801-201ENSMUST00000184174 223 ntBASIC18.83■□□□□ 0.6
Trim30aP15533 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim30aP15533 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim30aP15533 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim30aP15533 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim30aP15533 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
Trim30aP15533 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim30aP15533 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim30aP15533 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim30aP15533 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Trim30aP15533 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim30aP15533 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.83■□□□□ 0.6
Trim30aP15533 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Trim30aP15533 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim30aP15533 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim30aP15533 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Trim30aP15533 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim30aP15533 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Gm22238-201ENSMUST00000175222 88 ntBASIC18.82■□□□□ 0.6
Trim30aP15533 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.82■□□□□ 0.6
Trim30aP15533 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.82■□□□□ 0.6
Trim30aP15533 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim30aP15533 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30aP15533 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.81■□□□□ 0.6
Trim30aP15533 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30aP15533 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30aP15533 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim30aP15533 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30aP15533 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30aP15533 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim30aP15533 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.81■□□□□ 0.6
Trim30aP15533 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30aP15533 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim30aP15533 Spcs1-204ENSMUST00000226782 949 ntBASIC18.81■□□□□ 0.6
Trim30aP15533 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.81■□□□□ 0.6
Trim30aP15533 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim30aP15533 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30aP15533 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Trim30aP15533 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.81■□□□□ 0.6
Trim30aP15533 Cap2-205ENSMUST00000225824 1634 ntBASIC18.81■□□□□ 0.6
Trim30aP15533 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30aP15533 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim30aP15533 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30aP15533 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30aP15533 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30aP15533 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30aP15533 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim30aP15533 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30aP15533 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30aP15533 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Trim30aP15533 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30aP15533 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30aP15533 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30aP15533 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Trim30aP15533 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30aP15533 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30aP15533 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30aP15533 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Trim30aP15533 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Trim30aP15533 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.79■□□□□ 0.6
Trim30aP15533 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30aP15533 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim30aP15533 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim30aP15533 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30aP15533 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30aP15533 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30aP15533 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30aP15533 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30aP15533 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30aP15533 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30aP15533 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim30aP15533 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30aP15533 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim30aP15533 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30aP15533 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30aP15533 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30aP15533 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms