Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccl1P10146 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccl1P10146 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccl1P10146 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.31□□□□□ -0.28
Ccl1P10146 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccl1P10146 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccl1P10146 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.31□□□□□ -0.28
Ccl1P10146 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Ccl1P10146 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccl1P10146 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl1P10146 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccl1P10146 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccl1P10146 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ccl1P10146 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ccl1P10146 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccl1P10146 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccl1P10146 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Ccl1P10146 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.3□□□□□ -0.28
Ccl1P10146 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl1P10146 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl1P10146 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccl1P10146 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl1P10146 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccl1P10146 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Ccl1P10146 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.29□□□□□ -0.28
Ccl1P10146 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.29□□□□□ -0.28
Ccl1P10146 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccl1P10146 Gm26833-201ENSMUST00000180899 440 ntBASIC13.29□□□□□ -0.28
Ccl1P10146 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccl1P10146 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccl1P10146 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccl1P10146 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl1P10146 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccl1P10146 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl1P10146 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Ccl1P10146 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms