Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.28□□□□□ -0.12
CfdP03953 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CfdP03953 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CfdP03953 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.28□□□□□ -0.12
CfdP03953 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CfdP03953 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CfdP03953 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CfdP03953 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CfdP03953 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CfdP03953 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CfdP03953 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CfdP03953 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CfdP03953 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CfdP03953 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CfdP03953 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CfdP03953 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
CfdP03953 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
CfdP03953 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CfdP03953 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CfdP03953 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CfdP03953 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
CfdP03953 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CfdP03953 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CfdP03953 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CfdP03953 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.27□□□□□ -0.12
CfdP03953 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CfdP03953 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CfdP03953 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CfdP03953 Gm42778-201ENSMUST00000199644 553 ntBASIC14.27□□□□□ -0.13
CfdP03953 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.27□□□□□ -0.13
CfdP03953 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.27□□□□□ -0.13
CfdP03953 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.27□□□□□ -0.13
CfdP03953 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CfdP03953 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CfdP03953 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CfdP03953 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.27□□□□□ -0.13
CfdP03953 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CfdP03953 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CfdP03953 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CfdP03953 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CfdP03953 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CfdP03953 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CfdP03953 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
CfdP03953 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
CfdP03953 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CfdP03953 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CfdP03953 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CfdP03953 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CfdP03953 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.26□□□□□ -0.13
CfdP03953 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CfdP03953 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CfdP03953 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CfdP03953 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CfdP03953 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CfdP03953 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CfdP03953 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CfdP03953 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CfdP03953 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CfdP03953 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.25□□□□□ -0.13
CfdP03953 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CfdP03953 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.25□□□□□ -0.13
CfdP03953 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.25□□□□□ -0.13
CfdP03953 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CfdP03953 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.25□□□□□ -0.13
CfdP03953 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CfdP03953 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CfdP03953 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CfdP03953 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CfdP03953 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CfdP03953 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CfdP03953 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CfdP03953 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.25□□□□□ -0.13
CfdP03953 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CfdP03953 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CfdP03953 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CfdP03953 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CfdP03953 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
CfdP03953 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CfdP03953 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CfdP03953 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CfdP03953 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CfdP03953 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CfdP03953 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CfdP03953 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CfdP03953 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CfdP03953 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms