Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.1□□□□□ -0.47
Hbb-b1P02088 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hbb-b1P02088 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hbb-b1P02088 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hbb-b1P02088 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Hbb-b1P02088 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.08□□□□□ -0.48
Hbb-b1P02088 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.08□□□□□ -0.48
Hbb-b1P02088 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hbb-b1P02088 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.07□□□□□ -0.48
Hbb-b1P02088 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Gm43566-201ENSMUST00000196851 808 ntBASIC12.07□□□□□ -0.48
Hbb-b1P02088 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hbb-b1P02088 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.07□□□□□ -0.48
Hbb-b1P02088 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Hbb-b1P02088 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.06□□□□□ -0.48
Hbb-b1P02088 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hbb-b1P02088 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hbb-b1P02088 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms