Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm24245-201ENSMUST00000157318 57 ntBASIC17.52■□□□□ 0.4
Syn1O88935 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Syn1O88935 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syn1O88935 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syn1O88935 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syn1O88935 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Syn1O88935 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Syn1O88935 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Syn1O88935 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Syn1O88935 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Syn1O88935 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syn1O88935 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Syn1O88935 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.51■□□□□ 0.39
Syn1O88935 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Syn1O88935 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.51■□□□□ 0.39
Syn1O88935 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.51■□□□□ 0.39
Syn1O88935 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.51■□□□□ 0.39
Syn1O88935 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.51■□□□□ 0.39
Syn1O88935 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syn1O88935 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Syn1O88935 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Syn1O88935 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Syn1O88935 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syn1O88935 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syn1O88935 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Syn1O88935 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Syn1O88935 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syn1O88935 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syn1O88935 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Syn1O88935 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syn1O88935 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Syn1O88935 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Syn1O88935 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Syn1O88935 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Syn1O88935 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.5■□□□□ 0.39
Syn1O88935 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.5■□□□□ 0.39
Syn1O88935 Gm15467-201ENSMUST00000120582 445 ntBASIC17.5■□□□□ 0.39
Syn1O88935 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Syn1O88935 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.5■□□□□ 0.39
Syn1O88935 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syn1O88935 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Syn1O88935 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Syn1O88935 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.5■□□□□ 0.39
Syn1O88935 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syn1O88935 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Syn1O88935 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syn1O88935 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Syn1O88935 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Syn1O88935 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syn1O88935 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syn1O88935 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syn1O88935 Gm2756-201ENSMUST00000195851 400 ntBASIC17.49■□□□□ 0.39
Syn1O88935 Gm10060-201ENSMUST00000212002 111 ntBASIC17.49■□□□□ 0.39
Syn1O88935 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Syn1O88935 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syn1O88935 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Syn1O88935 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syn1O88935 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Syn1O88935 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syn1O88935 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syn1O88935 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syn1O88935 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syn1O88935 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Syn1O88935 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Syn1O88935 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.48■□□□□ 0.39
Syn1O88935 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.48■□□□□ 0.39
Syn1O88935 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.48■□□□□ 0.39
Syn1O88935 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Syn1O88935 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.48■□□□□ 0.39
Syn1O88935 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.48■□□□□ 0.39
Syn1O88935 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.48■□□□□ 0.39
Syn1O88935 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.48■□□□□ 0.39
Syn1O88935 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Syn1O88935 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Syn1O88935 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syn1O88935 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syn1O88935 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Syn1O88935 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Syn1O88935 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Syn1O88935 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.47■□□□□ 0.39
Syn1O88935 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.47■□□□□ 0.39
Syn1O88935 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.47■□□□□ 0.39
Syn1O88935 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.47■□□□□ 0.39
Syn1O88935 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.47■□□□□ 0.39
Syn1O88935 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms