Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.32■□□□□ 0.2
Hcn1O88704 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.32■□□□□ 0.2
Hcn1O88704 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn1O88704 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn1O88704 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn1O88704 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn1O88704 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn1O88704 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn1O88704 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn1O88704 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Hcn1O88704 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hcn1O88704 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Gm715-201ENSMUST00000117865 831 ntBASIC16.31■□□□□ 0.2
Hcn1O88704 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.31■□□□□ 0.2
Hcn1O88704 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.31■□□□□ 0.2
Hcn1O88704 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.31■□□□□ 0.2
Hcn1O88704 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hcn1O88704 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hcn1O88704 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Hcn1O88704 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcn1O88704 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.3■□□□□ 0.2
Hcn1O88704 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hcn1O88704 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Gm11643-201ENSMUST00000119578 864 ntBASIC16.3■□□□□ 0.2
Hcn1O88704 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Hcn1O88704 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.3■□□□□ 0.2
Hcn1O88704 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.3■□□□□ 0.2
Hcn1O88704 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hcn1O88704 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hcn1O88704 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hcn1O88704 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hcn1O88704 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hcn1O88704 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hcn1O88704 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.29■□□□□ 0.2
Hcn1O88704 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.29■□□□□ 0.2
Hcn1O88704 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.29■□□□□ 0.2
Hcn1O88704 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.29■□□□□ 0.2
Hcn1O88704 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hcn1O88704 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hcn1O88704 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.29■□□□□ 0.2
Hcn1O88704 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hcn1O88704 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 427.5 ms