Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Shoc2O88520 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shoc2O88520 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shoc2O88520 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.63■□□□□ 0.41
Shoc2O88520 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Shoc2O88520 Gm4974-201ENSMUST00000209974 875 ntBASIC17.63■□□□□ 0.41
Shoc2O88520 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Shoc2O88520 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shoc2O88520 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shoc2O88520 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shoc2O88520 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shoc2O88520 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shoc2O88520 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shoc2O88520 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shoc2O88520 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Shoc2O88520 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shoc2O88520 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shoc2O88520 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.62■□□□□ 0.41
Shoc2O88520 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.62■□□□□ 0.41
Shoc2O88520 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.62■□□□□ 0.41
Shoc2O88520 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.62■□□□□ 0.41
Shoc2O88520 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.62■□□□□ 0.41
Shoc2O88520 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.62■□□□□ 0.41
Shoc2O88520 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.62■□□□□ 0.41
Shoc2O88520 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shoc2O88520 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shoc2O88520 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shoc2O88520 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shoc2O88520 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shoc2O88520 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.62■□□□□ 0.41
Shoc2O88520 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Shoc2O88520 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Shoc2O88520 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.61■□□□□ 0.41
Shoc2O88520 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Shoc2O88520 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.61■□□□□ 0.41
Shoc2O88520 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Shoc2O88520 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.61■□□□□ 0.41
Shoc2O88520 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shoc2O88520 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shoc2O88520 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shoc2O88520 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.6■□□□□ 0.41
Shoc2O88520 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shoc2O88520 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.6■□□□□ 0.41
Shoc2O88520 Gm10252-201ENSMUST00000209541 832 ntBASIC17.6■□□□□ 0.41
Shoc2O88520 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Shoc2O88520 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shoc2O88520 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shoc2O88520 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shoc2O88520 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shoc2O88520 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shoc2O88520 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Shoc2O88520 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shoc2O88520 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shoc2O88520 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shoc2O88520 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.6■□□□□ 0.41
Shoc2O88520 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Shoc2O88520 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Gm12085-201ENSMUST00000119263 940 ntBASIC17.59■□□□□ 0.41
Shoc2O88520 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.59■□□□□ 0.41
Shoc2O88520 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.59■□□□□ 0.41
Shoc2O88520 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.59■□□□□ 0.41
Shoc2O88520 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Shoc2O88520 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.59■□□□□ 0.41
Shoc2O88520 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Shoc2O88520 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Shoc2O88520 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shoc2O88520 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.58■□□□□ 0.41
Shoc2O88520 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Shoc2O88520 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shoc2O88520 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Shoc2O88520 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shoc2O88520 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shoc2O88520 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Shoc2O88520 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Shoc2O88520 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.58■□□□□ 0.4
Shoc2O88520 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms