Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Gm4995-201ENSMUST00000117247 432 ntBASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Gm14822-201ENSMUST00000122247 291 ntBASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Gm12260-201ENSMUST00000122447 411 ntBASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf17O88472 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.82■□□□□ 0.12
Tnfrsf17O88472 Gm14494-201ENSMUST00000118786 435 ntBASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Rprl3-201ENSMUST00000157400 290 ntBASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf17O88472 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf17O88472 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Gm14057-201ENSMUST00000120631 482 ntBASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Gm27867-201ENSMUST00000184778 125 ntBASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf17O88472 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tnfrsf17O88472 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms