Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pdlim3O70209 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pdlim3O70209 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.48■□□□□ 0.07
Pdlim3O70209 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.48■□□□□ 0.07
Pdlim3O70209 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pdlim3O70209 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.47■□□□□ 0.07
Pdlim3O70209 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Pdlim3O70209 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pdlim3O70209 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.47■□□□□ 0.07
Pdlim3O70209 Gm26524-201ENSMUST00000192339 390 ntBASIC15.47■□□□□ 0.07
Pdlim3O70209 Rab3c-203ENSMUST00000224180 967 ntBASIC15.47■□□□□ 0.07
Pdlim3O70209 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pdlim3O70209 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pdlim3O70209 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim3O70209 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim3O70209 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.46■□□□□ 0.07
Pdlim3O70209 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim3O70209 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim3O70209 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim3O70209 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim3O70209 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Pdlim3O70209 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim3O70209 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim3O70209 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.46■□□□□ 0.07
Pdlim3O70209 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim3O70209 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim3O70209 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pdlim3O70209 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pdlim3O70209 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pdlim3O70209 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pdlim3O70209 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pdlim3O70209 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pdlim3O70209 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Pdlim3O70209 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Pdlim3O70209 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.45■□□□□ 0.06
Pdlim3O70209 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pdlim3O70209 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms