Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh5O55240 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh5O55240 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.16■□□□□ 0.18
Rdh5O55240 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh5O55240 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rdh5O55240 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh5O55240 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh5O55240 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh5O55240 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh5O55240 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh5O55240 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh5O55240 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh5O55240 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh5O55240 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.15■□□□□ 0.18
Rdh5O55240 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh5O55240 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh5O55240 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh5O55240 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh5O55240 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh5O55240 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh5O55240 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Rdh5O55240 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.15■□□□□ 0.18
Rdh5O55240 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.15■□□□□ 0.18
Rdh5O55240 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rdh5O55240 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rdh5O55240 Gm37055-201ENSMUST00000191866 133 ntBASIC16.15■□□□□ 0.18
Rdh5O55240 Gm37025-201ENSMUST00000195159 829 ntBASIC16.15■□□□□ 0.18
Rdh5O55240 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh5O55240 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh5O55240 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh5O55240 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rdh5O55240 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.15■□□□□ 0.18
Rdh5O55240 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh5O55240 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Rdh5O55240 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.15■□□□□ 0.18
Rdh5O55240 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rdh5O55240 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh5O55240 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rdh5O55240 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.14■□□□□ 0.17
Rdh5O55240 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rdh5O55240 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rdh5O55240 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.14■□□□□ 0.17
Rdh5O55240 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rdh5O55240 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.13■□□□□ 0.17
Rdh5O55240 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.13■□□□□ 0.17
Rdh5O55240 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Gm17661-201ENSMUST00000170317 270 ntBASIC16.13■□□□□ 0.17
Rdh5O55240 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rdh5O55240 Gm38027-201ENSMUST00000192315 235 ntBASIC16.13■□□□□ 0.17
Rdh5O55240 Timm23-208ENSMUST00000226683 750 ntBASIC16.13■□□□□ 0.17
Rdh5O55240 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rdh5O55240 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rdh5O55240 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rdh5O55240 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rdh5O55240 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Rdh5O55240 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Rdh5O55240 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rdh5O55240 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Gm13836-201ENSMUST00000121159 501 ntBASIC16.12■□□□□ 0.17
Rdh5O55240 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.12■□□□□ 0.17
Rdh5O55240 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rdh5O55240 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rdh5O55240 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms