Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trdmt1O55055 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trdmt1O55055 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.76■□□□□ 0.59
Trdmt1O55055 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trdmt1O55055 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trdmt1O55055 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Trdmt1O55055 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trdmt1O55055 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trdmt1O55055 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trdmt1O55055 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trdmt1O55055 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trdmt1O55055 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trdmt1O55055 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trdmt1O55055 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trdmt1O55055 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.75■□□□□ 0.59
Trdmt1O55055 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.75■□□□□ 0.59
Trdmt1O55055 Gm13884-201ENSMUST00000118103 829 ntBASIC18.75■□□□□ 0.59
Trdmt1O55055 Gm15372-201ENSMUST00000120729 834 ntBASIC18.75■□□□□ 0.59
Trdmt1O55055 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Gm29707-201ENSMUST00000196325 491 ntBASIC18.75■□□□□ 0.59
Trdmt1O55055 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdmt1O55055 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trdmt1O55055 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trdmt1O55055 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trdmt1O55055 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Trdmt1O55055 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trdmt1O55055 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trdmt1O55055 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trdmt1O55055 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trdmt1O55055 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trdmt1O55055 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trdmt1O55055 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trdmt1O55055 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Trdmt1O55055 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.74■□□□□ 0.59
Trdmt1O55055 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trdmt1O55055 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trdmt1O55055 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trdmt1O55055 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trdmt1O55055 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trdmt1O55055 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trdmt1O55055 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Trdmt1O55055 Gm18421-201ENSMUST00000204122 625 ntBASIC18.73■□□□□ 0.59
Trdmt1O55055 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trdmt1O55055 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trdmt1O55055 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.73■□□□□ 0.59
Trdmt1O55055 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trdmt1O55055 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trdmt1O55055 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trdmt1O55055 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.72■□□□□ 0.59
Trdmt1O55055 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trdmt1O55055 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trdmt1O55055 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trdmt1O55055 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trdmt1O55055 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.72■□□□□ 0.59
Trdmt1O55055 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.72■□□□□ 0.59
Trdmt1O55055 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.72■□□□□ 0.59
Trdmt1O55055 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trdmt1O55055 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Trdmt1O55055 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trdmt1O55055 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Trdmt1O55055 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trdmt1O55055 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trdmt1O55055 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trdmt1O55055 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trdmt1O55055 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.71■□□□□ 0.59
Trdmt1O55055 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdmt1O55055 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdmt1O55055 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trdmt1O55055 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trdmt1O55055 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdmt1O55055 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdmt1O55055 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdmt1O55055 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.71■□□□□ 0.59
Trdmt1O55055 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.71■□□□□ 0.59
Trdmt1O55055 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.71■□□□□ 0.59
Trdmt1O55055 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.71■□□□□ 0.59
Trdmt1O55055 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.71■□□□□ 0.59
Trdmt1O55055 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.71■□□□□ 0.59
Trdmt1O55055 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdmt1O55055 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trdmt1O55055 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdmt1O55055 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdmt1O55055 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdmt1O55055 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms