Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Matn3O35701 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.54■□□□□ 0.08
Matn3O35701 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.53■□□□□ 0.08
Matn3O35701 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Matn3O35701 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Matn3O35701 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Matn3O35701 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.53■□□□□ 0.08
Matn3O35701 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Matn3O35701 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Matn3O35701 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.53■□□□□ 0.08
Matn3O35701 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Matn3O35701 Gm13146-201ENSMUST00000118508 780 ntBASIC15.53■□□□□ 0.08
Matn3O35701 Gm29791-202ENSMUST00000207888 369 ntBASIC15.53■□□□□ 0.08
Matn3O35701 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Matn3O35701 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Matn3O35701 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.53■□□□□ 0.08
Matn3O35701 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.53■□□□□ 0.08
Matn3O35701 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Matn3O35701 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Matn3O35701 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Matn3O35701 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Matn3O35701 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Matn3O35701 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Matn3O35701 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Matn3O35701 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Matn3O35701 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Matn3O35701 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Matn3O35701 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.52■□□□□ 0.08
Matn3O35701 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.52■□□□□ 0.08
Matn3O35701 Gm18671-201ENSMUST00000214826 683 ntBASIC15.52■□□□□ 0.08
Matn3O35701 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Matn3O35701 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Matn3O35701 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Matn3O35701 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Matn3O35701 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Matn3O35701 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
Matn3O35701 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Matn3O35701 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Matn3O35701 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Matn3O35701 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Matn3O35701 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Matn3O35701 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.51■□□□□ 0.07
Matn3O35701 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.51■□□□□ 0.07
Matn3O35701 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Matn3O35701 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.51■□□□□ 0.07
Matn3O35701 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.51■□□□□ 0.07
Matn3O35701 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.51■□□□□ 0.07
Matn3O35701 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Matn3O35701 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Matn3O35701 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Matn3O35701 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Matn3O35701 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn3O35701 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn3O35701 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn3O35701 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn3O35701 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Matn3O35701 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Matn3O35701 Gm37179-201ENSMUST00000194862 823 ntBASIC15.5■□□□□ 0.07
Matn3O35701 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.5■□□□□ 0.07
Matn3O35701 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Matn3O35701 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.5■□□□□ 0.07
Matn3O35701 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.5■□□□□ 0.07
Matn3O35701 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.5■□□□□ 0.07
Matn3O35701 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Matn3O35701 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Matn3O35701 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn3O35701 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Matn3O35701 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn3O35701 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn3O35701 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.49■□□□□ 0.07
Matn3O35701 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn3O35701 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.49■□□□□ 0.07
Matn3O35701 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn3O35701 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.49■□□□□ 0.07
Matn3O35701 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn3O35701 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn3O35701 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn3O35701 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Matn3O35701 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Matn3O35701 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms