Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trove2O08848 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.52■□□□□ 0.4
Trove2O08848 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trove2O08848 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.52■□□□□ 0.4
Trove2O08848 Gm13148-201ENSMUST00000118892 745 ntBASIC17.52■□□□□ 0.4
Trove2O08848 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trove2O08848 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.52■□□□□ 0.4
Trove2O08848 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.52■□□□□ 0.4
Trove2O08848 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.52■□□□□ 0.4
Trove2O08848 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trove2O08848 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trove2O08848 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trove2O08848 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trove2O08848 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trove2O08848 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Trove2O08848 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trove2O08848 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trove2O08848 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Trove2O08848 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trove2O08848 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.51■□□□□ 0.39
Trove2O08848 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.51■□□□□ 0.39
Trove2O08848 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trove2O08848 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trove2O08848 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trove2O08848 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trove2O08848 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trove2O08848 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trove2O08848 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trove2O08848 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.5■□□□□ 0.39
Trove2O08848 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trove2O08848 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trove2O08848 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trove2O08848 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trove2O08848 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trove2O08848 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trove2O08848 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.5■□□□□ 0.39
Trove2O08848 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trove2O08848 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trove2O08848 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trove2O08848 Dancr-204ENSMUST00000132389 2347 ntBASIC17.5■□□□□ 0.39
Trove2O08848 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trove2O08848 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.5■□□□□ 0.39
Trove2O08848 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trove2O08848 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trove2O08848 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.5■□□□□ 0.39
Trove2O08848 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.5■□□□□ 0.39
Trove2O08848 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trove2O08848 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trove2O08848 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.49■□□□□ 0.39
Trove2O08848 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.49■□□□□ 0.39
Trove2O08848 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trove2O08848 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.49■□□□□ 0.39
Trove2O08848 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trove2O08848 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.48■□□□□ 0.39
Trove2O08848 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trove2O08848 Gm13216-201ENSMUST00000117145 591 ntBASIC17.48■□□□□ 0.39
Trove2O08848 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trove2O08848 Gm26524-201ENSMUST00000192339 390 ntBASIC17.48■□□□□ 0.39
Trove2O08848 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.48■□□□□ 0.39
Trove2O08848 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trove2O08848 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trove2O08848 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trove2O08848 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms