Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.12■□□□□ 0.01
Raet1aO08602 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Raet1aO08602 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.12■□□□□ 0.01
Raet1aO08602 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Raet1aO08602 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1aO08602 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Raet1aO08602 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1aO08602 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Raet1aO08602 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1aO08602 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Raet1aO08602 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Raet1aO08602 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Raet1aO08602 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1aO08602 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1aO08602 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.11■□□□□ 0.01
Raet1aO08602 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1aO08602 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1aO08602 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1aO08602 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.11■□□□□ 0.01
Raet1aO08602 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1aO08602 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1aO08602 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1aO08602 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1aO08602 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1aO08602 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1aO08602 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1aO08602 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1aO08602 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Raet1aO08602 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1aO08602 Gm7638-201ENSMUST00000121348 967 ntBASIC15.1■□□□□ 0.01
Raet1aO08602 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1aO08602 Gm9731-201ENSMUST00000209480 747 ntBASIC15.1■□□□□ 0.01
Raet1aO08602 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.1■□□□□ 0.01
Raet1aO08602 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.1■□□□□ 0.01
Raet1aO08602 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.1■□□□□ 0.01
Raet1aO08602 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1aO08602 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Raet1aO08602 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Raet1aO08602 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Raet1aO08602 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1aO08602 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Raet1aO08602 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Raet1aO08602 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1aO08602 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.1■□□□□ 0.01
Raet1aO08602 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.1■□□□□ 0.01
Raet1aO08602 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1aO08602 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1aO08602 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Raet1aO08602 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Raet1aO08602 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Raet1aO08602 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Raet1aO08602 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.09■□□□□ 0.01
Raet1aO08602 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.09■□□□□ 0.01
Raet1aO08602 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Raet1aO08602 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Raet1aO08602 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1aO08602 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.09■□□□□ 0.01
Raet1aO08602 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.08■□□□□ 0.01
Raet1aO08602 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Raet1aO08602 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Raet1aO08602 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Raet1aO08602 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Raet1aO08602 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1aO08602 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1aO08602 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.08■□□□□ 0
Raet1aO08602 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1aO08602 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.08■□□□□ 0
Raet1aO08602 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.08■□□□□ 0
Raet1aO08602 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Raet1aO08602 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.08■□□□□ 0
Raet1aO08602 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.08■□□□□ 0
Raet1aO08602 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1aO08602 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1aO08602 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1aO08602 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms