Protein–RNA interactions for Protein: J3QN17

Gm20918, Predicted gene, 20918, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20918J3QN17 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.4□□□□□ -0.1
Gm20918J3QN17 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.4□□□□□ -0.1
Gm20918J3QN17 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm20918J3QN17 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Gm20918J3QN17 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gm20918J3QN17 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Gm42545-201ENSMUST00000202755 922 ntBASIC14.39□□□□□ -0.11
Gm20918J3QN17 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm20918J3QN17 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.38□□□□□ -0.11
Gm20918J3QN17 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm20918J3QN17 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Gm27275-201ENSMUST00000184318 272 ntBASIC14.37□□□□□ -0.11
Gm20918J3QN17 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Gm4974-201ENSMUST00000209974 875 ntBASIC14.37□□□□□ -0.11
Gm20918J3QN17 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm20918J3QN17 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm20918J3QN17 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm20918J3QN17 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm20918J3QN17 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.36□□□□□ -0.11
Gm20918J3QN17 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm20918J3QN17 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gm20918J3QN17 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm20918J3QN17 Gm12382-201ENSMUST00000122005 922 ntBASIC14.36□□□□□ -0.11
Gm20918J3QN17 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.36□□□□□ -0.11
Gm20918J3QN17 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm20918J3QN17 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.36□□□□□ -0.11
Gm20918J3QN17 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm20918J3QN17 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms