Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-3J3QMG8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Gm11620-201ENSMUST00000118770 1845 ntBASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15□□□□□ -0.01
Trav13d-3J3QMG8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Il3ra-202ENSMUST00000223589 738 ntBASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-3J3QMG8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-3J3QMG8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Gm7791-201ENSMUST00000219066 539 ntBASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav13d-3J3QMG8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13d-3J3QMG8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms