Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28305F6U473 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28305F6U473 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.64□□□□□ -0.39
Gm28305F6U473 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28305F6U473 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28305F6U473 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28305F6U473 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28305F6U473 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28305F6U473 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Gm28305F6U473 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Gm28305F6U473 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Gm28305F6U473 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Gm28305F6U473 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Gm28305F6U473 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28305F6U473 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.63□□□□□ -0.39
Gm28305F6U473 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28305F6U473 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28305F6U473 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28305F6U473 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gm28305F6U473 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28305F6U473 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Gm28305F6U473 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.63□□□□□ -0.39
Gm28305F6U473 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28305F6U473 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gm28305F6U473 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28305F6U473 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28305F6U473 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28305F6U473 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm28305F6U473 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28305F6U473 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm28305F6U473 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Idnk-204ENSMUST00000226010 1898 ntBASIC12.62□□□□□ -0.39
Gm28305F6U473 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.62□□□□□ -0.39
Gm28305F6U473 Gm45444-201ENSMUST00000211394 898 ntBASIC12.62□□□□□ -0.39
Gm28305F6U473 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.62□□□□□ -0.39
Gm28305F6U473 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Gm28305F6U473 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.62□□□□□ -0.39
Gm28305F6U473 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm28305F6U473 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28305F6U473 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gm28305F6U473 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm28305F6U473 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm28305F6U473 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.61□□□□□ -0.39
Gm28305F6U473 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gm28305F6U473 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm28305F6U473 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm28305F6U473 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28305F6U473 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.6□□□□□ -0.39
Gm28305F6U473 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gm28305F6U473 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28305F6U473 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms